Basic Information
Locus ID:
gene.Thate05g00920
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 4574349 | 4576166 | + | gene.Thate05g00920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 65,339.72 Da | 51.01 | 70.30 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00060 | FHA | 7 | 98 | 6.91963E-20 | IPR000253 |
| Pfam | PF00498 | FHA domain | 30 | 97 | 6.8E-14 | IPR000253 |
| SUPERFAMILY | SSF49879 | SMAD/FHA domain | 4 | 102 | 3.44E-21 | IPR008984 |
| Gene3D | G3DSA:2.60.200.20 | - | 1 | 111 | 6.8E-26 | - |
| SMART | SM00240 | FHA_2 | 28 | 80 | 1.1E-7 | IPR000253 |
| ProSiteProfiles | PS50006 | Forkhead-associated (FHA) domain profile. | 29 | 80 | 12.5161 | IPR000253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 452 | - | - |
| Coils | Coil | Coil | 480 | 500 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14490.1 | SMAD/FHA domain-containing protein . | 0 |
| RefSeq | XP_010921439.1 | FHA domain-containing protein At4g14490-like [Elaeis guineensis] | 0 |
| O23305 | FHA domain-containing protein At4g14490 OS=Arabidopsis thaliana OX=3702 GN=At4g14490 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N067 | FHA domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_04G010860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg11110, jg26665, jg26666 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3079 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g158030 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2267, Sbi_jg34230 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2488 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005992 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl70993, Sgl74543, Sgl74584 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000014841, gene:ENSEOMG00000030523 ... |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.2AG0004150, CQ.Regalona.r1.2BG0005790 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30235330 |
| Apiaceae | Apium graveolens | 2 | Ag4G01797, Ag5G02579 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G010860, COCNU_16G004630 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701139, gene-LOC103720656 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1273.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G21630 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G02400.1, AT4G14490.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020728m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g01440.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g061140.2N, BniB01g061150.2N, BniB04g062430.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1151 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl04G2294, Cgl07G1208, Cgl08G1617, CglSG0066 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno03g13720 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0745s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate05g00920, gene.Thate09g08870 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 3 | nbisL1-mrna-12090, nbisL1-mrna-12091, nbisL1-mrna-5007 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.859 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00015667, Pov_00020983, Pov_00037551 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G03106 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.740, BH01.886, CH01.899 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0217840, gene-QOZ80_3BG0263080 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0253450.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_030214, gene-QYE76_052122, gene-QYE76_052137 ... |
| Poaceae | Oryza coarctata | 2 | Oco05G022460, Oco06G023330 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g51870.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G230700 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0403662, Pt_Chr0403670, Pt_Chr0604050, Pt_Chr0604053 ... |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G006310, Chr01G006350, Chr09G017530, Chr09G017540 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G453400 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG024200, gene_TRIDC3AG024270 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS3A02G174400.1, TraesCS3B02G204600.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb056120_P001, Zm00001eb215540_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14939, nbis-gene-16021 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g569 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG16.573 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g33690, gene.Posoc04g21000 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1244 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1570 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-818 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2505 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000019l.208 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001731 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19259 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1946 |
| Salicaceae | Populus euphratica | 1 | populus_peu21507 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132635133 |
| Solanaceae | Solanum chilense | 1 | SOLCI002439200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028984 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.14895_chr08_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G1209 |
| Zosteraceae | Zostera marina | 1 | Zosma04g16820.v3.1 |