halophFGD

Basic Information

Locus ID: gene.Thate04g28050

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: Belongs to the adaptor complexes medium subunit family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr04	509960497	509962717	-	gene.Thate04g28050

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.76	17,608.18 Da	72.85	90.80	0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	44	63	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	27	63	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	27	43	-	-

KEGG Pathway

KO Term:

K10875 (DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-])

Pathway:

ko03440 (Homologous recombination) map03440 (Homologous recombination)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G57460.1
RefSeq	XP_020962463.1	uncharacterized protein LOC107615682, partial [Arachis ipaensis]
TrEMBL	A0A218VZE5	uncharacterized protein LOC116198820 OS=Punica granatum OX=22663 GN=LOC116198820 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	14	gene.Thate02g30180, gene.Thate03g08470, gene.Thate04g16600 ... gene.Thate04g28040, gene.Thate04g28050, gene.Thate05g13670, gene.Thate05g17870, gene.Thate05g22830, gene.Thate05g27380, gene.Thate06g11940, gene.Thate06g11960, gene.Thate07g02280, gene.Thate08g24690, gene.Thate09g07300