Basic Information
Locus ID:
gene.Thate04g27520
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
BTB POZ domain-containing protein At3g05675-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 505870767 | 505879954 | + | gene.Thate04g27520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 52,269.45 Da | 53.99 | 95.80 | -0.08 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05675.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_017976005.1 | PREDICTED: BTB/POZ domain-containing protein At3g05675 [Theobroma cacao] | 0 |
| Q8RX01 | BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1 | 0 | |
| TrEMBL | A0A061EVN8 | Binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022951 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg31919, jg37380 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_14640, gene_2306 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_5g098380, BVRB_5g103650 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg15714, Sbi_jg24105, Sbi_jg56517, Sbi_jg7945 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg12091, Seu_jg13741 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00001810, GOSA_00010701 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl51466, Sgl52313, Sgl56754, Sgl57577, Sgl57590 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000004132, gene:ENSEOMG00000006888 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.5AG0005170, CQ.Regalona.r1.5AG0011070 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30133630, pistato.v30276570 |
| Apiaceae | Apium graveolens | 2 | Ag11G04683, Ag3G00671 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G008780, COCNU_09G001690, scaffold030973G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103695508, gene-LOC103701700, gene-LOC103716717 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.3415.V1.1, AsparagusV1_07.3437.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G31838, Ftri2G03110 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G05675.2, AT4G10800.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10020747m.g.v1.0, Thhalv10028868m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g04550.v2.2, Sp6g06700.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g051650.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq03G0624, Ceq04G0791 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G0718, Cgl04G0898 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno05g00290, gene.Cymno14g04880 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g12470, gene.Thate04g27520 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6014 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.1903, evm.TU.LG10.1588 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00011758, Pov_00013024, Pov_00028473 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09163 |
| Poaceae | Echinochloa crus-galli | 1 | CH03.3267 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_6AG0507130, gene-QOZ80_6BG0459190 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0505220.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_007052, gene-QYE76_027548, gene-QYE76_027615 |
| Poaceae | Oryza coarctata | 4 | Oco11G001350, Oco12G001260, Oco13G015280, Oco14G016110 |
| Poaceae | Oryza sativa | 2 | LOC_Os06g03840.1, LOC_Os07g47260.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G270800, gene-BS78_10G021800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0700959, Pt_Chr0700960 |
| Poaceae | Sporobolus alterniflorus | 9 | Chr03G011390, Chr10G006210, Chr11G013100, Chr11G023970 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G576800, Tel7E01G131100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4AG063500, gene_TRIDC5AG052700 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS4A02G428700.1.cds1, TraesCS5A02G360300.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb320450_P001, Zm00001eb378460_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-40290, nbis-gene-50740 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29027, Zma_g29899, Zma_g31276 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG10.351, evm.TU.LG13.388, evm.TU.LG17.348 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g01140, gene.Posoc06g11350 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.54, evm.TU.Scaffold_1_RagTag.1332 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18356, nbisL1-mrna-6267 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-11325, nbisL1-mrna-18164 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-4111, nbisL1-mrna-8663, nbisL1-mrna-8664 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000007l.182, add.evm.TU.utg000016l.161 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016244 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-23189, nbisL1-mrna-7568 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-11037, nbisL1-mrna-13508 |
| Salicaceae | Populus euphratica | 4 | populus_peu03738, populus_peu12408, populus_peu25964 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132625042, gene-LOC132625923 |
| Solanaceae | Solanum chilense | 2 | SOLCI005917000, SOLCI007440600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008520, gene-LOC107015108 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.13821_chr05_+, gene_13226 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G3140, TC05G2737 |
| Zosteraceae | Zostera marina | 2 | Zosma01g35460.v3.1, Zosma01g37320.v3.1 |