Basic Information
Locus ID:
gene.Thate04g27270
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 503775986 | 503780293 | - | gene.Thate04g27270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 68,757.98 Da | 42.20 | 94.38 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 2.6E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 306 | 571 | 3.6E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 289 | 580 | 2.8E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 200 | 1.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 594 | 5.4E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 213 | 6.8E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 274 | 381 | 7.3E-37 | - |
| SMART | SM00220 | serkin_6 | 305 | 574 | 1.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 560 | 34.845268 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 605 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_010257839.1 | PREDICTED: protein NSP-INTERACTING KINASE 1-like [Nelumbo nucifera] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8A7F5 | protein NSP-INTERACTING KINASE 1-like OS=Nelumbo nucifera OX=4432 GN=LOC104597812 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology