Basic Information
Locus ID:
gene.Thate04g25440
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 491651759 | 491697895 | - | gene.Thate04g25440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 59,618.42 Da | 52.14 | 89.89 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 65 | 489 | 2.8E-179 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 77 | 471 | 1.15E-147 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 72 | 488 | 1.3E-184 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 6 | 520 | 2.3E-226 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15415.1 | Protein phosphatase 2A regulatory B subunit family protein. B' regulatory subunit of PP2A (AtB'gamma) | 0 |
| RefSeq | XP_010927329.1 | serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Elaeis guineensis] | 0 |
| Q8RW96 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana OX=3702 GN=B'GAMMA PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9RJH0 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology