Basic Information
Locus ID:
gene.Thate04g25420
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 491512494 | 491558340 | - | gene.Thate04g25420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 81,058.11 Da | 45.07 | 96.15 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 7.4E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 438 | 708 | 1.6E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 136 | 195 | 3.3E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 710 | 1.37E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 242 | 6.38E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 513 | 1.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 724 | 1.4E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 257 | 3.4E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 88 | 116 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 158 | 181 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 204 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 157 | 52.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 714 | 36.838165 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_010252506.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Nelumbo nucifera] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZFK6 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104594077 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology