Basic Information
Locus ID:
gene.Thate04g23990
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Thioredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 479428926 | 479462668 | + | gene.Thate04g23990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 85,951.30 Da | 53.73 | 80.94 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 446 | 706 | 3.4075E-84 | - |
| CDD | cd01989 | STK_N | 15 | 146 | 2.24127E-55 | - |
| Pfam | PF00069 | Protein kinase domain | 440 | 688 | 2.1E-41 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 16 | 135 | 3.3E-6 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 134 | 1.93E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 699 | 2.29E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 420 | 512 | 1.2E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 143 | 1.6E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 513 | 718 | 6.8E-47 | - |
| SMART | SM00220 | serkin_6 | 440 | 706 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 706 | 35.763981 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 558 | 570 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 768 | - | - |
| Coils | Coil | Coil | 306 | 333 | - | - |
| Coils | Coil | Coil | 352 | 372 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019052672.1 | PREDICTED: U-box domain-containing protein 35-like isoform X3 [Nelumbo nucifera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8Q228 | U-box domain-containing protein 35-like isoform X3 OS=Nelumbo nucifera OX=4432 GN=LOC104593863 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology