Basic Information
Locus ID:
gene.Thate04g21050
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 429945688 | 429976299 | - | gene.Thate04g21050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 103,487.06 Da | 35.18 | 92.99 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 890 | 4.18458E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 886 | 4.2E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 236 | 292 | 2.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 372 | 2.28E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 904 | 4.99E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 177 | 1.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 276 | 1.2E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 909 | 1.5E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 425 | 3.7E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 692 | 9.8E-36 | - |
| SMART | SM00220 | serkin_6 | 617 | 896 | 1.1E-34 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 260 | 282 | 8.366514 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 891 | 37.587265 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010930348.3 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Elaeis guineensis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1ZFZ8 | Putative leucine-rich repeat receptor-like protein kinase At5g49770 OS=Anthurium amnicola OX=1678845 GN=At5g49770_14 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology