Basic Information
Locus ID:
gene.Thate04g21010
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 426688178 | 426760891 | - | gene.Thate04g21010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 86,241.59 Da | 38.01 | 96.21 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 259 | 294 | 2.1E-6 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 774 | 1.9E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 599 | 783 | 5.8E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 389 | 9.86E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 784 | 2.3E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 275 | 7.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 692 | 1.4E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 177 | 4.4E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 276 | 428 | 3.0E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 617 | 777 | 3.0E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 784 | 29.191669 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 260 | 282 | 7.257614 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020245616.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Asparagus officinalis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1ZFZ8 | Putative leucine-rich repeat receptor-like protein kinase At5g49770 OS=Anthurium amnicola OX=1678845 GN=At5g49770_14 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology