Basic Information
Locus ID:
gene.Thate04g20960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 425707416 | 425708794 | + | gene.Thate04g20960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 25,132.52 Da | 71.44 | 89.25 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 54 | 92 | 2.3E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 120 | 2.22E-9 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 127 | 228 | 2.75E-15 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 50 | 102 | 4.0E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 105 | 227 | 1.3E-8 | IPR015915 |
| SMART | SM00256 | fbox_2 | 54 | 94 | 2.1E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006402638.1 | F-box/kelch-repeat protein SKIP20 [Eutrema salsugineum] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843XM22 | F-box domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_053781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology