Basic Information
Locus ID:
gene.Thate04g17840
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 326869899 | 326876379 | + | gene.Thate04g17840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 111,811.78 Da | 41.75 | 102.72 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 526 | 585 | 2.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 288 | 346 | 1.4E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 239 | 258 | 0.32 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 215 | 236 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 62 | 4.2E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 980 | 3.4E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 454 | 514 | 2.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 200 | 5.5E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 982 | 2.16E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 258 | 8.16E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 518 | 592 | 2.04E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 205 | 516 | 1.02E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1010 | 2.4E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 617 | 3.8E-81 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 790 | 1.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 183 | 2.8E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 332 | 3.9E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 261 | 4.1E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 381 | 405 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 407 | 429 | 330.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 1007 | 3.3E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 477 | 500 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 572 | 5.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 213 | 280.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 239 | 261 | 7.427029 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 986 | 38.279831 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1008 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010904898.1 | receptor-like protein kinase HSL1 [Elaeis guineensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A426XLQ9 | Protein kinase domain-containing protein (Fragment) OS=Ensete ventricosum OX=4639 GN=B296_00043177 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology