Basic Information
Locus ID:
gene.Thate04g10960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 111938130 | 111939830 | + | gene.Thate04g10960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 16,520.82 Da | 36.52 | 91.72 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 43 | 106 | 1.1E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 106 | 6.53E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 40 | 106 | 1.7E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 151 | 12.471148 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09840.11 | - | 0 |
| RefSeq | XP_023523015.1 | shaggy-related protein kinase alpha-like, partial [Cucurbita pepo subsp. pepo] | 0 |
| P51139 | Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa OX=3879 GN=MSK-3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A452XWX7 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20646 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0014760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.1253.V1.1, AsparagusV1_07.3327.V1.1 ... |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate03g09050, gene.Thate04g10960, gene.Thate04g20310 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g06350 |