Basic Information
Locus ID:
gene.Thate04g05110
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32863019 | 32915447 | - | gene.Thate04g05110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 101,580.74 Da | 50.15 | 84.46 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 733 | 906 | 5.34528E-63 | - |
| Pfam | PF06337 | DUSP domain | 40 | 140 | 3.5E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 316 | 905 | 1.5E-83 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 18 | 140 | 2.62E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 314 | 908 | 6.87E-111 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 13 | 154 | 4.4E-31 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 155 | 239 | 6.2E-6 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 719 | 911 | 1.1E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 302 | 535 | 2.0E-67 | - |
| SMART | SM00695 | dusp | 36 | 143 | 1.1E-19 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 316 | 908 | 57.427109 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 17 | 140 | 19.339621 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 317 | 332 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 850 | 867 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 693 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_038977530.1 | ubiquitin carboxyl-terminal hydrolase 9-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZVY4 | Ubiquitin carboxyl-terminal hydrolase OS=Phoenix dactylifera OX=42345 GN=LOC120103833 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology