Basic Information
Locus ID:
gene.Thate04g05020
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32537979 | 32541329 | - | gene.Thate04g05020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 55,395.37 Da | 44.09 | 84.73 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 77 | 274 | 5.7E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 314 | 5.66E-65 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 315 | 466 | 4.34E-13 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 293 | 466 | 1.8E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 284 | 4.8E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 154 | 3.9E-18 | - |
| SMART | SM00220 | serkin_6 | 69 | 319 | 9.8E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 333 | 37.898212 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19360.1 | calcium-dependent protein kinase 34. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_044475782.1 | calcium-dependent protein kinase 29-like isoform X2 [Mangifera indica] | 0 |
| Q3E9C0 | Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CPK34 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P6AWN6 | calcium-dependent protein kinase 29 isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111312842 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate02g33970, gene.Thate04g05000, gene.Thate04g05020 |