Basic Information
Locus ID:
gene.Thate04g04980
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CPK15
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32353550 | 32355853 | - | gene.Thate04g04980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 59,996.21 Da | 56.56 | 83.93 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 91 | 348 | 8.96203E-104 | - |
| Pfam | PF00069 | Protein kinase domain | 91 | 348 | 2.2E-66 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 392 | 514 | 2.97E-5 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 410 | 7.69E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 174 | 1.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 354 | 5.2E-56 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 392 | 459 | 5.5E-6 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 368 | 513 | 5.5E-6 | - |
| SMART | SM00219 | tyrkin_6 | 91 | 354 | 1.7E-9 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 91 | 349 | 45.954594 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 97 | 124 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 209 | 221 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76040.3 | - | 0 |
| RefSeq | XP_021827494.1 | calcium-dependent protein kinase 29 [Prunus avium] | 0 |
| Q8RWL2 | Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CPK29 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5TK80 | calcium-dependent protein kinase 29 OS=Prunus avium OX=42229 GN=LOC110768115 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g33950, gene.Thate02g33960, gene.Thate04g04940 ... |