Basic Information
Locus ID:
gene.Thate04g04960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CDPK9
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32195035 | 32198192 | - | gene.Thate04g04960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 61,959.63 Da | 56.05 | 87.15 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 82 | 338 | 1.75891E-112 | - |
| Pfam | PF00069 | Protein kinase domain | 82 | 339 | 1.4E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 371 | 8.77E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 374 | 523 | 5.09E-18 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 354 | 525 | 5.2E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 346 | 4.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 165 | 4.3E-23 | - |
| SMART | SM00220 | serkin_6 | 82 | 339 | 1.9E-94 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 492 | 527 | 8.655371 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 339 | 48.809662 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 200 | 212 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 88 | 115 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76040.2 | calcium-dependent protein kinase 29. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010536433.1 | PREDICTED: calcium-dependent protein kinase 29 [Tarenaya hassleriana] | 0 |
| P53683 | Calcium-dependent protein kinase 19 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0V0IQ74 | Putative calcium-dependent protein kinase-like OS=Solanum chacoense OX=4108 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g33950, gene.Thate02g33960, gene.Thate04g04940 ... |