Basic Information
Locus ID:
gene.Thate04g04940
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CPK15
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32189221 | 32190877 | - | gene.Thate04g04940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 34,252.34 Da | 54.25 | 82.68 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 11 | 117 | 3.5E-22 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 178 | 288 | 4.08E-6 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 151 | 1.63E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 129 | 1.4E-29 | - |
| SMART | SM00220 | serkin_6 | 2 | 117 | 2.1E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 117 | 19.255468 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20410.1 | calmodulin-domain protein kinase 9. calmodulin-domain protein kinase CDPK isoform 9 (CPK9) | 0 |
| RefSeq | XP_012454022.1 | calcium-dependent protein kinase 21 isoform X2 [Gossypium raimondii] | 0 |
| P53683 | Calcium-dependent protein kinase 19 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A822XW78 | Calcium-dependent protein kinase OS=Nelumbo nucifera OX=4432 GN=HUJ06_024822 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g33950, gene.Thate02g33960, gene.Thate04g04940 ... |