Basic Information
Locus ID:
gene.Thate04g04330
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 27245892 | 27252024 | - | gene.Thate04g04330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 62,327.14 Da | 43.30 | 81.20 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08276 | PAN-like domain | 349 | 376 | 2.5E-5 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 473 | 559 | 6.8E-17 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 93 | 195 | 3.7E-31 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 93 | 200 | 1.23E-23 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 561 | 2.95E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 547 | 7.7E-32 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 37 | 167 | 6.6E-13 | IPR036426 |
| SMART | SM00108 | blect_4 | 51 | 169 | 5.7E-20 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 471 | 568 | 13.955218 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 45 | 166 | 14.103048 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 477 | 499 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.2 | - | 0 |
| RefSeq | XP_034579744.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Setaria viridis] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7I8KA17 | Receptor-like serine/threonine-protein kinase OS=Spirodela intermedia OX=51605 GN=SI8410_04005260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g04310, gene.Thate04g04330 |