Basic Information
Locus ID:
gene.Thate04g04310
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Protein kinase; unclassified specificity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 26996953 | 27093398 | - | gene.Thate04g04310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 133,007.81 Da | 38.58 | 82.70 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 351 | 437 | 1.35318E-17 | - |
| CDD | cd00028 | B_lectin | 831 | 945 | 2.56898E-32 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 519 | 792 | 1.01446E-92 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 953 | 1028 | 9.4E-11 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 93 | 195 | 1.1E-30 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 355 | 418 | 2.0E-15 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 873 | 945 | 8.4E-19 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 515 | 789 | 9.0E-49 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 230 | 338 | 6.6E-16 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 859 | 936 | 1.05E-18 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 93 | 200 | 3.8E-23 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 500 | 790 | 2.6E-76 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 819 | 947 | 3.2E-20 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 487 | 589 | 2.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 807 | 2.9E-55 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 37 | 167 | 2.0E-12 | IPR036426 |
| SMART | SM00220 | serkin_6 | 513 | 797 | 1.6E-28 | IPR000719 |
| SMART | SM00108 | blect_4 | 831 | 941 | 2.2E-31 | IPR001480 |
| SMART | SM00108 | blect_4 | 51 | 169 | 5.7E-20 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 45 | 166 | 14.103048 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 353 | 438 | 9.580109 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 513 | 790 | 36.103195 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 825 | 946 | 18.962299 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 519 | 541 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 635 | 647 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_021287453.1 | uncharacterized protein LOC110418950 [Herrania umbratica] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1AKI9 | uncharacterized protein LOC110418950 OS=Herrania umbratica OX=108875 GN=LOC110418950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g04310, gene.Thate04g04330 |