Basic Information
Locus ID:
gene.Thate04g04130
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 25004324 | 25013610 | + | gene.Thate04g04130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 80,990.42 Da | 51.29 | 70.73 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 512 | 648 | 1.0E-26 | IPR025558 |
| Pfam | PF00069 | Protein kinase domain | 168 | 425 | 1.3E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 168 | 427 | 9.31E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 241 | 440 | 1.7E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 163 | 237 | 1.5E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 432 | 19.15653 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010275342.1 | PREDICTED: uncharacterized protein LOC104610424 [Nelumbo nucifera] | 0 |
| Q9SJQ1 | Leucine-rich repeat receptor-like protein kinase PXC1 OS=Arabidopsis thaliana OX=3702 GN=PXC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8B3I9 | uncharacterized protein LOC104610424 OS=Nelumbo nucifera OX=4432 GN=LOC104610424 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.681.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g04130 |
| Solanaceae | Lycium barbarum | 44 | gene-LOC132599789, gene-LOC132601267, gene-LOC132601380 ... |
| Solanaceae | Solanum chilense | 37 | SOLCI000177100, SOLCI000563900, SOLCI001032000 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107022842, gene-LOC114076821, gene-LOC114077933 |