Basic Information
Locus ID:
gene.Thate04g03440
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 20504366 | 20611777 | + | gene.Thate04g03440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 108,729.40 Da | 34.78 | 89.43 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 693 | 953 | 6.32136E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 290 | 347 | 5.2E-10 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 420 | 605 | 2.0E-41 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 690 | 949 | 7.1E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 92 | 380 | 3.23E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 953 | 1.2E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 965 | 1.1E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 277 | 3.6E-48 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 419 | 610 | 8.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 398 | 4.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 656 | 760 | 1.1E-34 | - |
| SMART | SM00220 | serkin_6 | 687 | 953 | 5.2E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 959 | 37.050175 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 805 | 817 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 715 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_042510118.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Macadamia integrifolia] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835RZV0 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_005591 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology