Basic Information
Locus ID:
gene.Thate04g03420
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 20065417 | 20167167 | + | gene.Thate04g03420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 115,173.53 Da | 35.89 | 89.47 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 719 | 981 | 3.3176E-95 | - |
| Pfam | PF11721 | Malectin domain | 446 | 631 | 2.7E-42 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 314 | 373 | 3.0E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 716 | 977 | 5.0E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 981 | 1.27E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 118 | 409 | 3.23E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 988 | 7.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 682 | 788 | 1.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 301 | 4.0E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 423 | 3.9E-26 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 445 | 637 | 4.1E-34 | - |
| SMART | SM00220 | serkin_6 | 713 | 981 | 1.4E-30 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 339 | 362 | 7.172906 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 987 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 741 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1005 | 1030 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_019710848.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1XM42 | Putative LRR receptor-like serine/threonine-protein kinase At1g56130 (Fragment) OS=Anthurium amnicola OX=1678845 GN=At1g56130_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology