Basic Information
Locus ID:
gene.Thate04g03390
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 19801227 | 19966748 | + | gene.Thate04g03390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 110,161.26 Da | 35.43 | 89.36 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 693 | 955 | 9.52429E-93 | - |
| Pfam | PF11721 | Malectin domain | 420 | 605 | 6.8E-42 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 690 | 952 | 3.9E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 290 | 347 | 1.6E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 955 | 5.4E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 92 | 380 | 2.55E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 398 | 4.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 656 | 762 | 3.6E-35 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 419 | 611 | 4.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 965 | 5.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 277 | 4.4E-48 | IPR032675 |
| SMART | SM00220 | serkin_6 | 687 | 955 | 1.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 961 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 807 | 819 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_015571303.2 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Ricinus communis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835RZV0 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_005591 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology