Basic Information
Locus ID:
gene.Thate04g02370
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
kinase protein binding protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 13338183 | 13340393 | + | gene.Thate04g02370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 58,442.06 Da | 53.14 | 73.47 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 177 | 520 | 2.7422E-159 | - |
| Pfam | PF00069 | Protein kinase domain | 179 | 331 | 2.7E-35 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 399 | 502 | 3.3E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 520 | 1.89E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 266 | 519 | 1.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 173 | 265 | 5.4E-21 | - |
| SMART | SM00220 | serkin_6 | 178 | 502 | 5.0E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 178 | 502 | 44.95108 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 300 | 312 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 131 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26610.1 | D6 protein kinase like 1. | 0 |
| RefSeq | XP_010909306.1 | serine/threonine-protein kinase D6PKL1 [Elaeis guineensis] | 0 |
| Q9SUA3 | Serine/threonine-protein kinase D6PKL1 OS=Arabidopsis thaliana OX=3702 GN=D6PKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QHE7 | serine/threonine-protein kinase D6PKL1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105035447 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9016 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014420 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g195020 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40751, Sbi_jg50749 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2304 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007916 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42086, Sgl46859 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012193, gene:ENSEOMG00000033445 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0021220, CQ.Regalona.r1.8BG0021150 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30127760, pistato.v30255310 |
| Apiaceae | Apium graveolens | 1 | Ag4G01486 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G000710, scaffold007047G000020 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103703840, gene-LOC103708779 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G24698 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G26700.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028571m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g08880.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g016930.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0664 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0688 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g02370, gene.Thate09g13070 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-725 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.971 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G32658 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.468, BH02.493, CH02.535 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0011590, gene-QOZ80_1BG0060230 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0241270.1 |
| Poaceae | Oryza coarctata | 2 | Oco01G003060, Oco02G003090 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g07940.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G045500 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G019850, Chr03G005300, Chr05G010840, Chr08G005810 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G217300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG015990, gene_TRIDC3BG020820 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G128200.1, TraesCS3B02G147300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb122700_P001 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10046, Zma_g7702 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG16.1479, evm.TU.LG23.1163, evm.TU.LG26.186 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g12140, gene.Posoc09g12400 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.353 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13216 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8541 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16756 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.235 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16535 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14728 |
| Salicaceae | Populus euphratica | 1 | populus_peu28827 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636748 |
| Solanaceae | Solanum chilense | 1 | SOLCI005760400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005649 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.4518_chr03_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1677 |
| Zosteraceae | Zostera marina | 1 | Zosma05g07730.v3.1 |