Basic Information
Locus ID:
gene.Thate04g02180
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 12422416 | 12444141 | + | gene.Thate04g02180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 99,835.08 Da | 45.48 | 87.25 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 864 | 2.46224E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 241 | 300 | 1.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 588 | 801 | 2.4E-45 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 336 | 369 | 0.064 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 70 | 3.0E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 562 | 861 | 9.07E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 440 | 1.26E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 457 | 7.1E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 886 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 330 | 1.2E-72 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 546 | 662 | 3.1E-36 | - |
| SMART | SM00220 | serkin_6 | 585 | 865 | 7.2E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 240 | 263 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 314 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 395 | 419 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 0.0074 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 865 | 40.159653 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_018844049.1 | receptor-like kinase TMK4 [Juglans regia] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1YNT5 | Putative receptor protein kinase TMK1 (Fragment) OS=Anthurium amnicola OX=1678845 GN=TMK1_8 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology