Basic Information
Locus ID:
gene.Thate04g01790
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 10665967 | 10670806 | + | gene.Thate04g01790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 68,718.90 Da | 44.60 | 90.06 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 23 | 126 | 4.03114E-45 | - |
| Pfam | PF00651 | BTB/POZ domain | 30 | 134 | 1.9E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 216 | 484 | 7.6E-94 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 134 | 2.43E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 9 | 163 | 1.7E-10 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 216 | 508 | 95.708931 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 31 | 101 | 10.385409 | IPR000210 |
| Coils | Coil | Coil | 563 | 583 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_008800153.1 | BTB/POZ domain-containing protein At5g03250-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1XLW7 | BTB/POZ domain-containing protein At5g03250 OS=Anthurium amnicola OX=1678845 GN=At5g03250_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology