Basic Information
Locus ID:
gene.Thate04g01000
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 6169797 | 6190572 | + | gene.Thate04g01000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 89,708.19 Da | 51.18 | 75.29 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15532 | PHD2_CHD_II | 456 | 495 | 1.9178E-15 | - |
| Pfam | PF16135 | Tify domain binding domain | 389 | 438 | 2.1E-17 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 165 | 220 | 1.8E-14 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 456 | 497 | 1.7E-8 | IPR019787 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 694 | 787 | 9.27E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 441 | 497 | 4.53E-18 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 537 | 596 | 2.44E-6 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 538 | 602 | 1.5E-10 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 441 | 518 | 6.8E-20 | IPR013083 |
| SMART | SM00249 | PHD_3 | 546 | 600 | 0.003 | IPR001965 |
| SMART | SM00249 | PHD_3 | 455 | 496 | 4.7E-12 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 453 | 498 | 10.5669 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 456 | 495 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 261 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_008779219.1 | uncharacterized protein LOC103698933 isoform X1 [Phoenix dactylifera] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7I8K1C0 | PHD-type domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_02002171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology