Basic Information
Locus ID:
gene.Thate03g25400
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 538910349 | 538915328 | - | gene.Thate03g25400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 44,077.45 Da | 47.08 | 91.08 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 213 | 331 | 1.2E-8 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 34 | 107 | 8.0E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 180 | 332 | 1.7E-14 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 29 | 171 | 1.44E-16 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 171 | 332 | 6.5E-8 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 22 | 170 | 1.2E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 59 | 174 | 1.2 | IPR000782 |
| SMART | SM00554 | fasc_3 | 225 | 332 | 3.3E-5 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 185 | 329 | 11.093836 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 23 | 172 | 10.428185 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 367 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_030549521.1 | fasciclin-like arabinogalactan protein 2 [Rhodamnia argentea] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NXH8 | Fasciclin-like arabinogalactan protein 10 OS=Zostera marina OX=29655 GN=ZOSMA_52G01410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology