Basic Information
Locus ID:
gene.Thate03g25340
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 538681575 | 538695074 | - | gene.Thate03g25340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 88,850.34 Da | 42.81 | 82.30 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 83 | 279 | 2.14035E-98 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 97 | 256 | 1.1E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 261 | 762 | 7.9E-194 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 613 | 734 | 4.45E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 333 | 591 | 5.99E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 74 | 289 | 2.1E-60 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 331 | 503 | 1.0E-72 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 591 | 738 | 3.8E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 504 | 590 | 4.0E-31 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 60 | 303 | 2.2E-88 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 96 | 258 | 3.3E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 53 | 778 | 3.2E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 94 | 103 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 191 | 213 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 265 | 283 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 246 | 263 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 144 | 161 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 162 | 179 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 95 | 117 | 1.6E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 74 | 94 | 1.6E-61 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 71 | 735 | 25.949686 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 315 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_020114769.1 | heat shock protein 90-5, chloroplastic-like [Ananas comosus] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5H5B1 | heat shock protein 90-5, chloroplastic-like OS=Ananas comosus OX=4615 GN=LOC109728698 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology