Basic Information
Locus ID:
gene.Thate03g24810
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Thiamine pyrophosphate enzyme, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 536852189 | 536859869 | - | gene.Thate03g24810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 64,472.77 Da | 25.71 | 90.39 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 384 | 574 | 1.2714E-80 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 26 | 186 | 1.39236E-92 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 430 | 561 | 1.8E-13 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 219 | 331 | 1.2E-20 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 22 | 189 | 1.8E-34 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 384 | 586 | 6.61E-38 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 22 | 193 | 3.25E-44 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 214 | 359 | 1.79E-30 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 377 | 576 | 6.0E-52 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 19 | 195 | 2.6E-59 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 209 | 371 | 6.1E-39 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 18 | 586 | 3.1E-204 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_008805886.2 | pyruvate decarboxylase 1 [Phoenix dactylifera] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CTR7 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103718720 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology