Basic Information
Locus ID:
gene.Thate03g24300
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
proline-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 533779350 | 533788142 | + | gene.Thate03g24300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 53,855.93 Da | 51.95 | 83.90 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00010 | AAI_LTSS | 28 | 92 | 4.12797E-13 | - |
| Pfam | PF14368 | Probable lipid transfer | 8 | 96 | 5.8E-9 | IPR016140 |
| Pfam | PF00069 | Protein kinase domain | 351 | 444 | 1.0E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 254 | 454 | 7.69E-64 | IPR011009 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 22 | 103 | 8.65E-12 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 23 | 96 | 9.1E-10 | IPR036312 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 226 | 342 | 1.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 345 | 478 | 3.9E-35 | - |
| SMART | SM00220 | serkin_6 | 267 | 486 | 5.3E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 487 | 26.477942 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 273 | 295 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 358 | 370 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 241 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_021905682.1 | proline-rich receptor-like protein kinase PERK4 isoform X2 [Carica papaya] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835PL36 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_023955 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag1G00437 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g24300 |