Basic Information
Locus ID:
gene.Thate03g21000
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Protein STRUBBELIG-RECEPTOR FAMILY 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 512683725 | 512781215 | + | gene.Thate03g21000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 75,035.13 Da | 47.85 | 89.50 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 60 | 7.9E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 654 | 9.2E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 192 | 8.0E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 227 | 6.8E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 654 | 1.5E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 463 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 664 | 3.1E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 253 | 1.8E-50 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 181 | 203 | 7.180607 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 663 | 33.968964 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 155 | 168 | 7.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 134 | 147 | 7.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_043710998.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X1 [Telopea speciosissima] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5GMD9 | protein STRUBBELIG-RECEPTOR FAMILY 5 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109724602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology