Basic Information
Locus ID:
gene.Thate03g19960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 493334569 | 493335657 | + | gene.Thate03g19960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 38,448.90 Da | 53.56 | 73.62 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 174 | 207 | 1.0E-8 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 112 | 160 | 3.3E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 66 | 1.96E-6 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 86 | 359 | 1.96E-41 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 22 | 291 | 1.6E-36 | IPR015915 |
| SMART | SM00612 | kelc_smart | 174 | 221 | 3.1E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 122 | 170 | 3.1E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_008809023.2 | F-box/kelch-repeat protein At1g80440-like [Phoenix dactylifera] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CYC1 | F-box/kelch-repeat protein At1g80440-like OS=Phoenix dactylifera OX=42345 GN=LOC103720857 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology