Basic Information
Locus ID:
gene.Thate03g19950
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 492938474 | 492946392 | + | gene.Thate03g19950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 58,192.01 Da | 57.74 | 69.76 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 356 | 391 | 1.0E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 309 | 341 | 4.5E-6 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 189 | 249 | 3.01E-7 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 270 | 544 | 4.05E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 256 | 537 | 3.5E-31 | IPR015915 |
| SMART | SM00612 | kelc_smart | 306 | 354 | 8.2E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 358 | 405 | 0.1 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_008809024.2 | F-box/kelch-repeat protein At1g80440-like [Phoenix dactylifera] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CY06 | F-box/kelch-repeat protein At1g80440-like OS=Phoenix dactylifera OX=42345 GN=LOC103720858 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology