Basic Information
Locus ID:
gene.Thate03g19900
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 488399927 | 488401024 | + | gene.Thate03g19900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 38,797.19 Da | 55.27 | 73.01 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 128 | 160 | 2.9E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 175 | 210 | 1.6E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 87 | 342 | 5.36E-41 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 61 | 4.06E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 81 | 357 | 1.7E-32 | IPR015915 |
| SMART | SM00612 | kelc_smart | 125 | 173 | 0.047 | IPR006652 |
| SMART | SM00612 | kelc_smart | 177 | 224 | 0.0068 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_008809024.2 | F-box/kelch-repeat protein At1g80440-like [Phoenix dactylifera] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843X6G4 | F-box domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_045369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology