Basic Information
Locus ID:
gene.Thate03g17220
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Tetratricopeptide repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 393959342 | 393963364 | + | gene.Thate03g17220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 33,839.16 Da | 52.30 | 90.23 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 219 | 239 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27460.2 | - | 0 |
| RefSeq | XP_042509518.1 | protein NPGR1 isoform X2 [Macadamia integrifolia] | 0 |
| Q9CB03 | Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A4PEU7 | Putative tetratricopeptide-like helical domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr14g0368211 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 12 | gene.Thate01g20700, gene.Thate02g25440, gene.Thate03g17220 ... |
| Poaceae | Zea mays | 1 | Zm00001eb067120_P001 |