Basic Information
Locus ID:
gene.Thate03g17090
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 390110453 | 390201759 | - | gene.Thate03g17090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 92,645.91 Da | 39.19 | 91.41 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 559 | 692 | 7.39148E-25 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 561 | 691 | 1.1E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 715 | 757 | 7.7E-9 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 521 | 766 | 7.99E-61 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 693 | 778 | 5.4E-96 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 520 | 781 | 5.4E-96 | IPR027417 |
| SMART | SM00382 | AAA_5 | 557 | 694 | 3.8E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 664 | 683 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 758 | 778 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010915761.1 | lon protease homolog, mitochondrial isoform X2 [Elaeis guineensis] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9QVA9 | lon protease homolog, mitochondrial isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105040776 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology