Basic Information
Locus ID:
gene.Thate03g09540
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 102618566 | 102654352 | - | gene.Thate03g09540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 67,171.32 Da | 35.09 | 81.08 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 9 | 218 | 1.7E-52 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 259 | 484 | 3.4E-55 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 274 | 450 | 7.4E-180 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 17 | 485 | 7.4E-180 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.2 | - | 0 |
| RefSeq | XP_050376329.1 | proteinaceous RNase P 2 [Potentilla anserina] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P6QDG6 | ribonuclease P OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0043991 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology