Basic Information
Locus ID:
gene.Thate03g09050
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 94644261 | 94657694 | - | gene.Thate03g09050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 17,137.21 Da | 46.26 | 87.33 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 31 | 95 | 6.8E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 92 | 4.75E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 92 | 8.0E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 161 | 11.877521 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26751.1 | shaggy-related kinase 11. encodes a SHAGGY-related kinase involved in meristem organization. | 0 |
| RefSeq | XP_023523015.1 | shaggy-related protein kinase alpha-like, partial [Cucurbita pepo subsp. pepo] | 0 |
| Q40518 | Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum OX=4097 GN=NTK-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6WBD2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G345500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20646 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0014760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.1253.V1.1, AsparagusV1_07.3327.V1.1 ... |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate03g09050, gene.Thate04g10960, gene.Thate04g20310 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g06350 |