Basic Information
Locus ID:
gene.Thate03g05660
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 39346599 | 39349699 | - | gene.Thate03g05660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 108,690.57 Da | 37.89 | 102.08 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 528 | 587 | 1.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 703 | 925 | 1.1E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 8.2E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 171 | 193 | 0.85 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 272 | 592 | 8.63E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 314 | 6.35E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 991 | 1.78E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 627 | 3.3E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 1000 | 3.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 142 | 8.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 777 | 1.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 208 | 3.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 315 | 6.7E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 168 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 193 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 17.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 700 | 1000 | 5.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 1000 | 36.371742 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 706 | 728 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 823 | 835 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_010939310.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Elaeis guineensis] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843TRB8 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_004322 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology