Basic Information
Locus ID:
gene.Thate03g01880
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 9122859 | 9135215 | - | gene.Thate03g01880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.99 | 46,082.03 Da | 59.82 | 82.57 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 220 | 371 | 1.8E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 188 | 380 | 2.16E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 292 | 385 | 1.2E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 200 | 291 | 4.2E-35 | - |
| SMART | SM00220 | serkin_6 | 215 | 416 | 1.7E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 215 | 416 | 27.198776 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 221 | 244 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 336 | 348 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_044375262.1 | receptor-like protein kinase FERONIA [Triticum aestivum] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S6R4Q7 | Feronia (Fragment) OS=Lepidium campestre OX=65351 GN=FER PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51577, Sbi_jg51578 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020759 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G08520 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2172, Ceq01G2211 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2412, Cgl01G2458 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g04300 |
| Hydrocharitaceae | Thalassia testudinum | 32 | gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250360 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58004 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830 |
| Zosteraceae | Zostera marina | 2 | Zosma04g11040.v3.1, Zosma06g12330.v3.1 |