Basic Information
Locus ID:
gene.Thate03g00710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 3236578 | 3238199 | + | gene.Thate03g00710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 27,727.34 Da | 53.49 | 97.11 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 228 | 5.44E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 232 | 2.3E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 201 | 224 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 72 | 101 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 48 | 71 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 170.0 | IPR003591 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047982586.1 | receptor protein kinase TMK1-like [Salvia hispanica] | 0 |
| TrEMBL | A0A8X8YND0 | Uncharacterized protein OS=Salvia splendens OX=180675 GN=SASPL_100962 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg15149, jg16419, jg32726, jg36042, jg3660, jg37631 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_2303, gene_5719 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah003155, Ah027727 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_5g098480, BVRB_5g098490, BVRB_7g171050 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg1483, Sbi_jg15694, Sbi_jg35067, Sbi_jg56494 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg13726, Seu_jg3260 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00001790, GOSA_00003427 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl51474, Sgl56762, Sgl72686, Sgl76225 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000005613, gene:ENSEOMG00000021607 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.5AG0010940, CQ.Regalona.r1.5BG0011450 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30055780, pistato.v30276610 |
| Apiaceae | Apium graveolens | 3 | Ag10G01679, Ag10G02087, Ag2G01819 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G017700, COCNU_11G003470 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103721007, gene-LOC120105881 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_04.740.V1.1, AsparagusV1_09.128.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G32663 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G0781, Ceq05G1865 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G0892, Cgl05G1859 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g00430, gene.Cymno05g00260 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate02g18620, gene.Thate03g00710, gene.Thate09g01890 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-8529 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1919 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00003693, Pov_00026592 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G26380 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2775, BH09.3012, CH09.3178 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4AG0298700, gene-QOZ80_4BG0329400 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0213660.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_047608, gene-QYE76_047689 |
| Poaceae | Oryza coarctata | 2 | Oco07G019790, Oco08G019070 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g58910.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G291200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307083 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G000470, Chr25G000350, Chr26G018750 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G978400, Tel2E01G978600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG078960, gene_TRIDC2BG087240 |
| Poaceae | Triticum aestivum | 3 | TraesCS2B02G602000.1, TraesCS2D02G595000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb091830_P001, Zm00001eb434220_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-23245, nbis-gene-6248 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20727, Zma_g22273 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG04.2788, evm.TU.LG07.729, evm.TU.LG15.208 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g01030, gene.Posoc05g21360 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_12_RagTag.505, evm.TU.Scaffold_13_RagTag.537 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-30548, nbisL1-mrna-4136, nbisL1-mrna-6260 |
| Rhizophoraceae | Ceriops tagal | 4 | nbisL1-mrna-12692, nbisL1-mrna-17031, nbisL1-mrna-4729 ... |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-10155, nbisL1-mrna-15928, nbisL1-mrna-19763 ... |
| Rhizophoraceae | Kandelia candel | 4 | evm.TU.utg000009l.613, evm.TU.utg000015l.284 ... |
| Rhizophoraceae | Kandelia obovata | 4 | Maker00005975, Maker00015387, Maker00017282, Maker00018017 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-12522, nbisL1-mrna-4201, nbisL1-mrna-7573 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-13513, nbisL1-mrna-15255, nbisL1-mrna-5696 |
| Salicaceae | Populus euphratica | 5 | populus_peu02459, populus_peu12415, populus_peu25942 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599373, gene-LOC132607224, gene-LOC132625917 |
| Solanaceae | Solanum chilense | 3 | SOLCI002681900, SOLCI003871800, SOLCI004708800 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107002659, gene-LOC107007879, gene-LOC107023779 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.26352_chr11_+, gene_13224 |
| Tamaricaceae | Tamarix chinensis | 2 | TC03G1648, TC05G2740 |
| Zosteraceae | Zostera marina | 3 | Zosma01g33630.v3.1, Zosma02g20590.v3.1, Zosma04g23670.v3.1 |