Basic Information
Locus ID:
gene.Thate02g41570
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 643545531 | 643575846 | - | gene.Thate02g41570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 61,014.40 Da | 43.34 | 92.76 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 77 | 518 | 5.7E-174 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 89 | 513 | 6.4E-141 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 84 | 517 | 1.1E-177 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 187 | 531 | 2.4E-181 | IPR002554 |
| PIRSF | PIRSF028043 | PP2A_B56 | 12 | 176 | 2.0E-22 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 60 | - | - |
| Coils | Coil | Coil | 486 | 506 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09880.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes B' regulatory subunit of PP2A (AtB'beta). | 0 |
| RefSeq | XP_042505171.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like [Macadamia integrifolia] | 0 |
| O04376 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana OX=3702 GN=B'BETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A833QUL2 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Carex littledalei OX=544730 GN=FCM35_KLT02617 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology