Basic Information
Locus ID:
gene.Thate02g40510
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 634729228 | 634744029 | + | gene.Thate02g40510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 84,330.07 Da | 48.51 | 67.90 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 143 | 398 | 1.58517E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 144 | 397 | 2.7E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 141 | 399 | 1.5E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 224 | 411 | 7.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 223 | 1.3E-23 | - |
| SMART | SM00220 | serkin_6 | 144 | 398 | 1.5E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 144 | 398 | 45.233761 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 150 | 173 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 265 | 277 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_019706580.1 | serine/threonine-protein kinase Nek2 isoform X2 [Elaeis guineensis] | 0 |
| Q2QMH1 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NI13 | Kinase family protein OS=Zostera marina OX=29655 GN=ZOSMA_95G00100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology