Basic Information
Locus ID:
gene.Thate02g40470
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
HMT3
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 634454575 | 634462104 | - | gene.Thate02g40470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 37,210.75 Da | 39.76 | 85.39 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 27 | 336 | 3.3E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 23 | 339 | 1.44E-80 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 16 | 335 | 5.2E-100 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 8 | 182 | 2.5E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 291 | 341 | 1.6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 14 | 336 | 45.450394 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_010938205.1 | homocysteine S-methyltransferase 2 isoform X1 [Elaeis guineensis] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SEN1 | homocysteine S-methyltransferase 2 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105057316 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology