Basic Information
Locus ID:
gene.Thate02g37910
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 615335590 | 615341018 | + | gene.Thate02g37910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 57,025.45 Da | 39.36 | 82.87 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 62 | 320 | 6.56723E-139 | - |
| Pfam | PF13833 | EF-hand domain pair | 381 | 431 | 3.3E-8 | IPR002048 |
| Pfam | PF13202 | EF hand | 443 | 463 | 0.0014 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 63 | 321 | 3.0E-75 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 351 | 488 | 4.28E-32 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 328 | 2.56E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 331 | 490 | 9.4E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 149 | 330 | 6.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 148 | 4.7E-28 | - |
| SMART | SM00054 | efh_1 | 404 | 432 | 0.52 | IPR002048 |
| SMART | SM00220 | serkin_6 | 63 | 321 | 7.5E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 440 | 468 | 0.027 | IPR002048 |
| SMART | SM00054 | efh_1 | 368 | 396 | 0.097 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 436 | 471 | 13.174425 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 9.26907 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 321 | 49.360889 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 364 | 399 | 12.05861 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 377 | 389 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 449 | 461 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 413 | 425 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 92 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_039114830.1 | calcium-dependent protein kinase 20-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5FFP3 | calcium-dependent protein kinase 20-like isoform X2 OS=Ananas comosus OX=4615 GN=LOC109712879 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology