Basic Information
Locus ID:
gene.Thate02g37310
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 610869930 | 610878174 | + | gene.Thate02g37310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 61,198.40 Da | 40.59 | 84.48 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 441 | 510 | 2.4E-14 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 104 | 425 | 1.8E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 104 | 423 | 2.11E-79 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 440 | 533 | 1.2E-6 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 103 | 432 | 4.2E-112 | - |
| SMART | SM00768 | X8_cls | 440 | 524 | 9.4E-38 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 338 | 351 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_009406531.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 4-like isoform X2 [Musa acuminata subsp. malaccensis] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4V4H4B4 | X8 domain-containing protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t30480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology