halophFGD

Basic Information

Locus ID: gene.Thate02g36890

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: Protein of unknown function (DUF632)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr02	608600712	608615752	-	gene.Thate02g36890

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.85	90,819.27 Da	65.15	62.53	-0.86

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04783	Protein of unknown function (DUF630)	77	135	4.9E-23	IPR006868
Pfam	PF04782	Protein of unknown function (DUF632)	377	681	8.9E-94	IPR006867
PRINTS	PR01217	Proline rich extensin signature	16	32	1.4E-11	-
PRINTS	PR01217	Proline rich extensin signature	220	245	1.4E-11	-
PRINTS	PR01217	Proline rich extensin signature	166	183	1.4E-11	-
PRINTS	PR01217	Proline rich extensin signature	138	154	1.4E-11	-
MobiDBLite	mobidb-lite	consensus disorder prediction	715	740	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	12	26	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	141	166	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	141	365	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	329	345	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	278	292	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	26	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	213	247	-	-
Coils	Coil	Coil	310	332	-	-
Coils	Coil	Coil	743	774	-	-
Coils	Coil	Coil	683	717	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G25590.1	Protein of unknown function (DUF630 and DUF632).
RefSeq	XP_008808244.2	nitrate regulatory gene2 protein-like [Phoenix dactylifera]
Swiss-Prot	Q9AQW1	Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL2 PE=2 SV=1
TrEMBL	A0A8B7CX40	nitrate regulatory gene2 protein-like OS=Phoenix dactylifera OX=42345 GN=LOC103720359 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg18170, jg7865
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13255, gene_26143
Amaranthaceae	Atriplex hortensis	2	Ah010741, Ah034872
Amaranthaceae	Beta vulgaris	2	BVRB_2g031650, BVRB_9g220720
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg11423, Sbi_jg21028, Sbi_jg22761, Sbi_jg46377
Amaranthaceae	Salicornia europaea	2	Seu_jg16635, Seu_jg20704
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00005280, GOSA_00018249
Amaranthaceae	Suaeda glauca	4	Sgl55904, Sgl61093, Sgl62434, Sgl66976
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000017478, gene:ENSEOMG00000018365 ... gene:ENSEOMG00000019194, gene:ENSEOMG00000037876, gene:ENSEOMG00000048987, gene:ENSEOMG00000052023
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.2AG0016570, CQ.Regalona.r1.2BG0018390 ... CQ.Regalona.r1.7BG0010960, CQ.Regalona.r1.9AG0013660
Anacardiaceae	Pistacia vera	2	pistato.v30125500, pistato.v30253280
Apiaceae	Apium graveolens	3	Ag10G02205, Ag6G01319, Ag9G01146
Arecaceae	Cocos nucifera	4	COCNU_12G004420, COCNU_16G001050, scaffold002164G000020 ... scaffold002164G000030
Arecaceae	Phoenix dactylifera	3	gene-LOC103695745, gene-LOC103714416, gene-LOC103720359
Asparagaceae	Asparagus officinalis	3	AsparagusV1_02.1461.V1.1, AsparagusV1_05.621.V1.1 ... AsparagusV1_07.863.V1.1
Asteraceae	Flaveria trinervia	2	Ftri16G10828, Ftri4G22733
Brassicaceae	Arabidopsis thaliana	2	AT1G52320.2, AT5G25590.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10003682m.g.v1.0, Thhalv10011250m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g38900.v2.2, Sp2g21940.v2.2
Brassicaceae	Brassica nigra	2	BniB02g078120.2N, BniB04g057510.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G2131, Ceq05G0262
Casuarinaceae	Casuarina glauca	1	Cgl04G2335
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g03250, gene.Cymno10g06160, gene.Cymno14g09790
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g10090, gene.Thate02g36890
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-3218, nbisL1-mrna-7412
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.359, evm.TU.LG07.1358
Plantaginaceae	Plantago ovata	3	Pov_00013652, Pov_00015418, Pov_00024966
Plumbaginaceae	Limonium bicolor	2	Lb3G18449, Lb3G21342
Poaceae	Echinochloa crus-galli	9	AH05.2081, AH05.2578, BH03.712, BH05.2214, BH05.2215 ... BH05.2664, CH03.811, CH05.2296, CH05.2756
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1BG0064850, gene-QOZ80_5AG0374340 ... gene-QOZ80_5BG0421970, gene-QOZ80_7AG0560590
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0064160.1, HORVU.MOREX.r3.2HG0122080.1 ... HORVU.MOREX.r3.3HG0260580.1
Poaceae	Lolium multiflorum	5	gene-QYE76_013445, gene-QYE76_013480, gene-QYE76_017584 ... gene-QYE76_035300, gene-QYE76_041717
Poaceae	Oryza coarctata	6	Oco01G010790, Oco02G011710, Oco09G008880, Oco10G009020 ... Oco13G003830, Oco14G004250
Poaceae	Oryza sativa	3	LOC_Os01g31580.1, LOC_Os05g32760.1, LOC_Os07g11070.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G102000, gene-BS78_09G134300, gene-BS78_K057600
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0303882, Pt_Chr0505141, Pt_Chr0505387
Poaceae	Sporobolus alterniflorus	10	Chr01G012530, Chr01G021130, Chr12G016830, Chr12G024200 ... Chr18G001180, Chr18G008490, Chr22G009160, Chr22G015280, Chr24G003740, Chr28G003110
Poaceae	Thinopyrum elongatum	4	Tel1E01G006400, Tel1E01G409000, Tel2E01G309400 ... Tel3E01G345900
Poaceae	Triticum dicoccoides	6	gene_TRIDC1AG037140, gene_TRIDC1BG042120 ... gene_TRIDC2AG019580, gene_TRIDC2BG023460, gene_TRIDC3AG028900, gene_TRIDC3BG034260
Poaceae	Triticum aestivum	9	TraesCS1A02G247500.1, TraesCS1B02G258100.1 ... TraesCS1D02G246700.1, TraesCS2A02G155900.1, TraesCS2B02G181100.1, TraesCS2D02G161700.1, TraesCS3A02G198900.1, TraesCS3B02G231600.1, TraesCS3D02G202100.2
Poaceae	Zea mays	3	Zm00001eb132150_P003, Zm00001eb303290_P001 ... Zm00001eb350970_P001
Poaceae	Zoysia japonica	3	nbis-gene-14524, nbis-gene-26653, nbis-gene-52843
Poaceae	Zoysia macrostachya	4	Zma_g26414, Zma_g26807, Zma_g28190, Zma_g6184
Portulacaceae	Portulaca oleracea	6	evm.TU.LG07.1704, evm.TU.LG07.634, evm.TU.LG08.1677 ... evm.TU.LG15.1511, evm.TU.LG15.306, evm.TU.LG22.582
Posidoniaceae	Posidonia oceanica	2	gene.Posoc03g06660, gene.Posoc06g17430
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_10_RagTag.1269 ... evm.TU.Scaffold_10_RagTag.791
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-13692, nbisL1-mrna-6987
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-11915, nbisL1-mrna-13887
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-8852, nbisL1-mrna-9040
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000004l.121, evm.TU.utg000033l.576
Rhizophoraceae	Kandelia obovata	2	Maker00003904, Maker00014769
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-16386, nbisL1-mrna-3823
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-18002, nbisL1-mrna-7924
Salicaceae	Populus euphratica	5	populus_peu02758, populus_peu02759, populus_peu04859 ... populus_peu12794, populus_peu33681
Solanaceae	Lycium barbarum	2	gene-LOC132633337, gene-LOC132635675
Solanaceae	Solanum chilense	1	SOLCI003331900
Solanaceae	Solanum pennellii	2	gene-LOC107015170, gene-LOC107028786
Tamaricaceae	Reaumuria soongarica	3	STRG.21287_chr09_-, STRG.4148_chr03_-, gene_10897
Tamaricaceae	Tamarix chinensis	3	TC01G1677, TC08G2049, TC10G1967
Zosteraceae	Zostera marina	2	Zosma03g29360.v3.1, Zosma06g22480.v3.1