Basic Information
Locus ID:
gene.Thate02g36710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 607735726 | 607811490 | - | gene.Thate02g36710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 51,858.61 Da | 53.69 | 51.98 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 208 | 264 | 2.0E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 387 | 443 | 7.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 378 | 446 | 7.59E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 204 | 266 | 1.7E-24 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 194 | 267 | 3.9E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 373 | 439 | 1.2E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 207 | 265 | 1.7E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 386 | 445 | 4.1E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 381 | 446 | 36.678391 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 202 | 266 | 22.262774 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_034683906.1 | probable WRKY transcription factor 3 isoform X1 [Vitis riparia] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7AE91 | Putative DNA binding protein WRKY2 OS=Davidia involucrata OX=16924 GN=Din_023689 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology