Basic Information
Locus ID:
gene.Thate02g35760
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 601458038 | 601459168 | - | gene.Thate02g35760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 42,865.59 Da | 63.41 | 88.11 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 35 | 6.3E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 44 | 1.44E-8 | IPR036047 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 178 | 286 | 4.0E-5 | IPR011044 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 101 | 2.5E-6 | IPR032675 |
| Coils | Coil | Coil | 192 | 212 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006658641.1 | F-box protein At5g49610-like [Oryza brachyantha] | 0 |
| TrEMBL | J3MLL7 | F-box domain-containing protein OS=Oryza brachyantha OX=4533 GN=102699608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g35740, gene.Thate02g35750, gene.Thate02g35760 ... |